Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 AC000077.1-201ENST00000420012 953 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 RPL18AP16-201ENST00000424057 531 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 AC079325.1-201ENST00000430386 857 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 RN7SL605P-201ENST00000577229 281 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.96□□□□□ -0.18
RIF1Q5UIP0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 LINC02447-202ENST00000501888 2146 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 DNM1P48-201ENST00000419538 439 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC091769.1-201ENST00000619576 568 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AL161772.1-201ENST00000610494 4412 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.95□□□□□ -0.18
RIF1Q5UIP0 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.95□□□□□ -0.18
RIF1Q5UIP0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 ODCP-201ENST00000459650 1639 ntBASIC13.94□□□□□ -0.18
RIF1Q5UIP0 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC105250.1-201ENST00000509378 2057 ntBASIC13.94□□□□□ -0.18
RIF1Q5UIP0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC145285.5-201ENST00000562217 361 ntBASIC13.94□□□□□ -0.18
RIF1Q5UIP0 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms