Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.08□□□□□ -0.32
EFNB1P98172 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
EFNB1P98172 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.08□□□□□ -0.32
EFNB1P98172 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.08□□□□□ -0.32
EFNB1P98172 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNB1P98172 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
EFNB1P98172 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 AL391647.1-201ENST00000395664 511 ntBASIC13.07□□□□□ -0.32
EFNB1P98172 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 AC011495.1-201ENST00000498085 584 ntBASIC13.07□□□□□ -0.32
EFNB1P98172 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.07□□□□□ -0.32
EFNB1P98172 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.07□□□□□ -0.32
EFNB1P98172 AC123567.1-201ENST00000548294 1261 ntBASIC13.07□□□□□ -0.32
EFNB1P98172 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.07□□□□□ -0.32
EFNB1P98172 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.07□□□□□ -0.32
EFNB1P98172 ENPP7P14-201ENST00000621765 1040 ntBASIC13.07□□□□□ -0.32
EFNB1P98172 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 PDIA3P1-201ENST00000471856 1510 ntBASIC13.07□□□□□ -0.32
EFNB1P98172 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
EFNB1P98172 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.07□□□□□ -0.32
EFNB1P98172 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.07□□□□□ -0.32
EFNB1P98172 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.07□□□□□ -0.32
EFNB1P98172 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.06□□□□□ -0.32
EFNB1P98172 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
EFNB1P98172 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
EFNB1P98172 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.06□□□□□ -0.32
EFNB1P98172 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 RN7SL48P-201ENST00000579283 293 ntBASIC13.06□□□□□ -0.32
EFNB1P98172 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNB1P98172 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
EFNB1P98172 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
EFNB1P98172 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNB1P98172 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms