Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RPL39P62891 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RPL39P62891 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RPL39P62891 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
RPL39P62891 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RPL39P62891 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 AC004832.2-201ENST00000426397 482 ntBASIC10.42□□□□□ -0.74
RPL39P62891 AL353779.1-201ENST00000434793 351 ntBASIC10.42□□□□□ -0.74
RPL39P62891 TPM4P1-201ENST00000436100 807 ntBASIC10.42□□□□□ -0.74
RPL39P62891 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.42□□□□□ -0.74
RPL39P62891 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
RPL39P62891 GAPDHP40-201ENST00000505218 1006 ntBASIC10.42□□□□□ -0.74
RPL39P62891 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.42□□□□□ -0.74
RPL39P62891 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 KRT126P-201ENST00000549467 1181 ntBASIC10.42□□□□□ -0.74
RPL39P62891 AC010336.2-201ENST00000564226 506 ntBASIC10.42□□□□□ -0.74
RPL39P62891 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 MTDHP5-201ENST00000598980 586 ntBASIC10.42□□□□□ -0.74
RPL39P62891 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
RPL39P62891 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 STRCP1-201ENST00000509801 5328 ntBASIC10.42□□□□□ -0.74
RPL39P62891 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RPL39P62891 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.42□□□□□ -0.74
RPL39P62891 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RPL39P62891 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.42□□□□□ -0.74
RPL39P62891 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
RPL39P62891 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms