Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 AC007686.3-201ENST00000619017 3487 ntBASIC14.27□□□□□ -0.13
PDX1P52945 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDX1P52945 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
PDX1P52945 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDX1P52945 AL008718.2-201ENST00000609206 1313 ntBASIC14.26□□□□□ -0.13
PDX1P52945 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDX1P52945 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 AC073150.1-201ENST00000450406 1084 ntBASIC14.26□□□□□ -0.13
PDX1P52945 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.26□□□□□ -0.13
PDX1P52945 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 RTN3P1-201ENST00000536295 711 ntBASIC14.26□□□□□ -0.13
PDX1P52945 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.26□□□□□ -0.13
PDX1P52945 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.26□□□□□ -0.13
PDX1P52945 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.26□□□□□ -0.13
PDX1P52945 AC012044.1-201ENST00000603431 297 ntBASIC14.26□□□□□ -0.13
PDX1P52945 AL353726.2-201ENST00000623259 884 ntBASIC14.26□□□□□ -0.13
PDX1P52945 Z98259.2-201ENST00000641583 609 ntBASIC14.26□□□□□ -0.13
PDX1P52945 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDX1P52945 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDX1P52945 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.26□□□□□ -0.13
PDX1P52945 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDX1P52945 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.25□□□□□ -0.13
PDX1P52945 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDX1P52945 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PDX1P52945 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.25□□□□□ -0.13
PDX1P52945 RPL17P11-201ENST00000417593 544 ntBASIC14.25□□□□□ -0.13
PDX1P52945 AL353637.1-201ENST00000451571 732 ntBASIC14.25□□□□□ -0.13
PDX1P52945 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.25□□□□□ -0.13
PDX1P52945 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 AC008267.1-201ENST00000474858 1069 ntBASIC14.25□□□□□ -0.13
PDX1P52945 AC090857.1-201ENST00000527400 390 ntBASIC14.25□□□□□ -0.13
PDX1P52945 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.25□□□□□ -0.13
PDX1P52945 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDX1P52945 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 RN7SL555P-201ENST00000584742 339 ntBASIC14.25□□□□□ -0.13
PDX1P52945 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 AC008805.1-201ENST00000590892 364 ntBASIC14.25□□□□□ -0.13
PDX1P52945 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.25□□□□□ -0.13
PDX1P52945 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDX1P52945 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.25□□□□□ -0.13
PDX1P52945 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDX1P52945 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
PDX1P52945 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms