Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.83□□□□□ -0.2
GABRA4P48169 AC245884.6-201ENST00000515672 1067 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.83□□□□□ -0.2
GABRA4P48169 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
GABRA4P48169 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 AC020922.3-201ENST00000595064 547 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 AL353770.1-201ENST00000614915 403 ntBASIC13.83□□□□□ -0.2
GABRA4P48169 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
GABRA4P48169 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
GABRA4P48169 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
GABRA4P48169 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GABRA4P48169 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GABRA4P48169 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 TSPY25P-201ENST00000429463 745 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.82□□□□□ -0.2
GABRA4P48169 AL133466.1-201ENST00000447582 150 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 UPF3AP2-201ENST00000457924 1132 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 RN7SL769P-201ENST00000469386 295 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.82□□□□□ -0.2
GABRA4P48169 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 AC090857.1-201ENST00000527400 390 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 AC005586.2-201ENST00000563946 837 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 AC079336.7-201ENST00000623428 1078 ntBASIC13.82□□□□□ -0.2
GABRA4P48169 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
GABRA4P48169 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
GABRA4P48169 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GABRA4P48169 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GABRA4P48169 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
GABRA4P48169 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GABRA4P48169 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.81□□□□□ -0.2
GABRA4P48169 KRT8P19-201ENST00000551916 1455 ntBASIC13.81□□□□□ -0.2
GABRA4P48169 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GABRA4P48169 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.81□□□□□ -0.2
GABRA4P48169 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.81□□□□□ -0.2
GABRA4P48169 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.81□□□□□ -0.2
GABRA4P48169 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.81□□□□□ -0.2
GABRA4P48169 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.81□□□□□ -0.2
GABRA4P48169 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GABRA4P48169 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms