Protein–RNA interactions for Protein: P47869

GABRA2, Gamma-aminobutyric acid receptor subunit alpha-2, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA2P47869 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GABRA2P47869 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GABRA2P47869 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GABRA2P47869 AC097359.2-201ENST00000604992 2389 ntBASIC12.55□□□□□ -0.4
GABRA2P47869 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GABRA2P47869 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GABRA2P47869 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 AL137784.3-201ENST00000623858 2288 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 AL354989.2-201ENST00000435838 1540 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 FAM197Y7-201ENST00000432892 766 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 GAPDHP21-201ENST00000450301 1010 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
GABRA2P47869 AL590640.2-201ENST00000457038 527 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 FTLP10-202ENST00000505798 471 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.54□□□□□ -0.4
GABRA2P47869 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.54□□□□□ -0.4
GABRA2P47869 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GABRA2P47869 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 CLUHP2-201ENST00000426660 1303 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GABRA2P47869 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 AL136172.1-201ENST00000598590 1394 ntBASIC12.54□□□□□ -0.4
GABRA2P47869 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GABRA2P47869 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.54□□□□□ -0.4
GABRA2P47869 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRA2P47869 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GABRA2P47869 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 POM121L8P-201ENST00000417732 1281 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRA2P47869 POM121L9P-203ENST00000441984 1285 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.53□□□□□ -0.4
GABRA2P47869 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GABRA2P47869 RNA5SP486-201ENST00000515961 83 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.53□□□□□ -0.4
GABRA2P47869 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.53□□□□□ -0.4
GABRA2P47869 GNRHR2-203ENST00000581100 1187 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRA2P47869 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.53□□□□□ -0.4
GABRA2P47869 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRA2P47869 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.53□□□□□ -0.4
GABRA2P47869 AC138951.2-201ENST00000623455 1161 ntBASIC12.53□□□□□ -0.4
GABRA2P47869 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.53□□□□□ -0.4
GABRA2P47869 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRA2P47869 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRA2P47869 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms