Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRIM23P36406 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM23P36406 AC245884.6-201ENST00000515672 1067 ntBASIC14.39□□□□□ -0.11
TRIM23P36406 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 MIR3188-201ENST00000583494 85 ntBASIC14.39□□□□□ -0.11
TRIM23P36406 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 MIR6074-201ENST00000612054 107 ntBASIC14.39□□□□□ -0.11
TRIM23P36406 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.39□□□□□ -0.11
TRIM23P36406 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM23P36406 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM23P36406 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM23P36406 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM23P36406 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM23P36406 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 AL009178.2-201ENST00000597278 2719 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM23P36406 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
TRIM23P36406 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM23P36406 OR2R1P-201ENST00000441404 914 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM23P36406 AL353637.1-201ENST00000451571 732 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 UPF3AP2-201ENST00000457924 1132 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM23P36406 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 SORD2P-201ENST00000558556 1069 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM23P36406 AC124068.2-201ENST00000569473 1109 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 AC068587.10-201ENST00000641210 219 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
TRIM23P36406 AC215219.1-201ENST00000400706 1817 ntBASIC14.38□□□□□ -0.11
TRIM23P36406 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM23P36406 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM23P36406 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIM23P36406 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM23P36406 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms