Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 AL590440.2-201ENST00000641973 1595 ntBASIC13.3□□□□□ -0.28
GDF1P27539 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
GDF1P27539 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 SLC25A24P2-201ENST00000415059 510 ntBASIC13.3□□□□□ -0.28
GDF1P27539 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.3□□□□□ -0.28
GDF1P27539 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.3□□□□□ -0.28
GDF1P27539 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 SCARNA21-201ENST00000517026 139 ntBASIC13.3□□□□□ -0.28
GDF1P27539 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 AL160314.3-201ENST00000556041 767 ntBASIC13.3□□□□□ -0.28
GDF1P27539 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 AC100757.4-201ENST00000626934 759 ntBASIC13.3□□□□□ -0.28
GDF1P27539 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 AL805961.1-203ENST00000641078 1258 ntBASIC13.3□□□□□ -0.28
GDF1P27539 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDF1P27539 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 CICP14-201ENST00000629111 2732 ntBASIC13.3□□□□□ -0.28
GDF1P27539 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.3□□□□□ -0.28
GDF1P27539 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
GDF1P27539 AC136759.1-202ENST00000530858 2194 ntBASIC13.3□□□□□ -0.28
GDF1P27539 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 AC006504.5-208ENST00000588784 2401 ntBASIC13.29□□□□□ -0.28
GDF1P27539 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.29□□□□□ -0.28
GDF1P27539 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.29□□□□□ -0.28
GDF1P27539 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GDF1P27539 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GDF1P27539 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.29□□□□□ -0.28
GDF1P27539 CYP46A4P-201ENST00000414953 267 ntBASIC13.29□□□□□ -0.28
GDF1P27539 VDAC1P1-201ENST00000439229 848 ntBASIC13.29□□□□□ -0.28
GDF1P27539 Z97180.1-201ENST00000445173 988 ntBASIC13.29□□□□□ -0.28
GDF1P27539 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDF1P27539 AC006122.1-201ENST00000493323 440 ntBASIC13.29□□□□□ -0.28
GDF1P27539 HLA-J-204ENST00000495278 958 ntBASIC13.29□□□□□ -0.28
GDF1P27539 AC125604.1-201ENST00000496255 707 ntBASIC13.29□□□□□ -0.28
GDF1P27539 RCC2P8-201ENST00000502779 1035 ntBASIC13.29□□□□□ -0.28
GDF1P27539 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 AC103988.2-201ENST00000561804 725 ntBASIC13.29□□□□□ -0.28
GDF1P27539 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.29□□□□□ -0.28
GDF1P27539 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.29□□□□□ -0.28
GDF1P27539 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms