Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHMP24386 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CHMP24386 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 KRT8P14-201ENST00000414254 1442 ntBASIC13.8□□□□□ -0.2
CHMP24386 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHMP24386 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.8□□□□□ -0.2
CHMP24386 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CHMP24386 AC016397.2-201ENST00000624848 1985 ntBASIC13.8□□□□□ -0.2
CHMP24386 PTENP1-202ENST00000532280 3996 ntBASIC13.8□□□□□ -0.2
CHMP24386 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHMP24386 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 MIR658-201ENST00000385210 100 ntBASIC13.79□□□□□ -0.2
CHMP24386 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.79□□□□□ -0.2
CHMP24386 AC007551.1-201ENST00000457394 519 ntBASIC13.79□□□□□ -0.2
CHMP24386 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 AC106760.1-201ENST00000508690 800 ntBASIC13.79□□□□□ -0.2
CHMP24386 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHMP24386 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.79□□□□□ -0.2
CHMP24386 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.79□□□□□ -0.2
CHMP24386 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 AC132938.4-201ENST00000623835 848 ntBASIC13.79□□□□□ -0.2
CHMP24386 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.79□□□□□ -0.2
CHMP24386 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.79□□□□□ -0.2
CHMP24386 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHMP24386 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.79□□□□□ -0.2
CHMP24386 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CHMP24386 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CHMP24386 CR383656.2-201ENST00000548656 2254 ntBASIC13.78□□□□□ -0.2
CHMP24386 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHMP24386 AC027612.1-201ENST00000445234 2395 ntBASIC13.78□□□□□ -0.2
CHMP24386 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms