Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC008805.1-201ENST00000590892 364 ntBASIC15.53■□□□□ 0.08
CCDC130P13994 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.53■□□□□ 0.08
CCDC130P13994 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC130P13994 AC244093.1-201ENST00000610837 814 ntBASIC15.53■□□□□ 0.08
CCDC130P13994 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC130P13994 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC130P13994 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC130P13994 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC130P13994 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC130P13994 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC130P13994 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC130P13994 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC130P13994 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CCDC130P13994 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CCDC130P13994 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC130P13994 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC130P13994 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC130P13994 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC130P13994 FAM58BP-201ENST00000439056 645 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 VDAC1P1-201ENST00000439229 848 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 TPT1P11-201ENST00000458482 498 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC130P13994 SCARNA21-201ENST00000517026 139 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC130P13994 MIR3615-201ENST00000581999 87 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC130P13994 AC009884.2-201ENST00000603110 324 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 AC004923.1-202ENST00000642106 209 ntBASIC15.52■□□□□ 0.08
CCDC130P13994 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC130P13994 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC130P13994 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC130P13994 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC130P13994 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC130P13994 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CCDC130P13994 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC130P13994 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCDC130P13994 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 CICP4-201ENST00000447359 2812 ntBASIC15.51■□□□□ 0.07
CCDC130P13994 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC130P13994 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC130P13994 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 DPM3-202ENST00000368399 517 ntBASIC15.51■□□□□ 0.07
CCDC130P13994 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC130P13994 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CCDC130P13994 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC130P13994 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC130P13994 AC006122.1-201ENST00000493323 440 ntBASIC15.51■□□□□ 0.07
CCDC130P13994 AC005740.2-201ENST00000511085 419 ntBASIC15.51■□□□□ 0.07
CCDC130P13994 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC130P13994 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.51■□□□□ 0.07
CCDC130P13994 RBM8B-201ENST00000555532 525 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms