Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 AL035414.1-201ENST00000451327 857 ntBASIC13.54□□□□□ -0.24
THBS1P07996 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.54□□□□□ -0.24
THBS1P07996 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.54□□□□□ -0.24
THBS1P07996 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.54□□□□□ -0.24
THBS1P07996 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.54□□□□□ -0.24
THBS1P07996 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 AP003171.2-201ENST00000528208 925 ntBASIC13.54□□□□□ -0.24
THBS1P07996 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.54□□□□□ -0.24
THBS1P07996 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 AL512343.1-201ENST00000605837 169 ntBASIC13.54□□□□□ -0.24
THBS1P07996 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.54□□□□□ -0.24
THBS1P07996 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.54□□□□□ -0.24
THBS1P07996 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 AC006453.4-201ENST00000636949 1252 ntBASIC13.54□□□□□ -0.24
THBS1P07996 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 AC064801.2-201ENST00000625052 1303 ntBASIC13.54□□□□□ -0.24
THBS1P07996 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.54□□□□□ -0.24
THBS1P07996 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.53□□□□□ -0.24
THBS1P07996 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 HSPA8P5-201ENST00000456928 2069 ntBASIC13.53□□□□□ -0.24
THBS1P07996 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 CNN2P8-201ENST00000421872 913 ntBASIC13.53□□□□□ -0.24
THBS1P07996 AC016694.1-201ENST00000434179 700 ntBASIC13.53□□□□□ -0.24
THBS1P07996 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.53□□□□□ -0.24
THBS1P07996 BCRP2-202ENST00000447763 634 ntBASIC13.53□□□□□ -0.24
THBS1P07996 AL590640.2-201ENST00000457038 527 ntBASIC13.53□□□□□ -0.24
THBS1P07996 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 BCRP6-201ENST00000510112 632 ntBASIC13.53□□□□□ -0.24
THBS1P07996 BCRP7-201ENST00000511549 544 ntBASIC13.53□□□□□ -0.24
THBS1P07996 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
THBS1P07996 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.53□□□□□ -0.24
THBS1P07996 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
THBS1P07996 AC008735.3-201ENST00000596646 500 ntBASIC13.53□□□□□ -0.24
THBS1P07996 AC026790.2-201ENST00000606282 430 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms