Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAPDHP04406 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GAPDHP04406 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 AC023794.5-201ENST00000564380 2157 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 AC098614.1-201ENST00000368528 745 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 DGCR5-201ENST00000399539 862 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 AL139094.1-201ENST00000405549 1188 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 KRT18P25-201ENST00000508931 1278 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.35□□□□□ -0.43
GAPDHP04406 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.35□□□□□ -0.43
GAPDHP04406 MIR3197-201ENST00000582241 73 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 AL358472.5-202ENST00000641448 1267 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 AC114271.1-201ENST00000612689 2813 ntBASIC12.35□□□□□ -0.43
GAPDHP04406 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.35□□□□□ -0.43
GAPDHP04406 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAPDHP04406 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.35□□□□□ -0.43
GAPDHP04406 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
GAPDHP04406 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GAPDHP04406 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GAPDHP04406 CES1P1-201ENST00000421606 1704 ntBASIC12.34□□□□□ -0.43
GAPDHP04406 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
GAPDHP04406 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GAPDHP04406 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.34□□□□□ -0.43
GAPDHP04406 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.34□□□□□ -0.43
GAPDHP04406 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.34□□□□□ -0.43
GAPDHP04406 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
GAPDHP04406 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAPDHP04406 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.34□□□□□ -0.43
GAPDHP04406 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.34□□□□□ -0.43
GAPDHP04406 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.34□□□□□ -0.43
GAPDHP04406 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms