Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 SERBP1P5-201ENST00000510079 1181 ntBASIC13.09□□□□□ -0.31
APOC1P02654 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.09□□□□□ -0.31
APOC1P02654 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 AC092364.2-202ENST00000597012 1073 ntBASIC13.09□□□□□ -0.31
APOC1P02654 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC1P02654 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 SALL4P5-201ENST00000419001 1760 ntBASIC13.09□□□□□ -0.31
APOC1P02654 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC1P02654 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC1P02654 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC1P02654 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
APOC1P02654 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.08□□□□□ -0.31
APOC1P02654 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC1P02654 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.08□□□□□ -0.31
APOC1P02654 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APOC1P02654 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
APOC1P02654 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.08□□□□□ -0.32
APOC1P02654 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 AL354702.1-201ENST00000442006 1960 ntBASIC13.08□□□□□ -0.32
APOC1P02654 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
APOC1P02654 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 KRT8P35-201ENST00000483942 1338 ntBASIC13.08□□□□□ -0.32
APOC1P02654 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC1P02654 AGGF1P1-201ENST00000509500 2073 ntBASIC13.08□□□□□ -0.32
APOC1P02654 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC1P02654 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
APOC1P02654 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms