Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC015688.4-201ENST00000580780 1647 ntBASIC14.66□□□□□ -0.06
PCDH8O95206 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH8O95206 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH8O95206 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH8O95206 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH8O95206 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH8O95206 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 DBET-201ENST00000630918 3363 ntBASIC14.65□□□□□ -0.06
PCDH8O95206 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH8O95206 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDH8O95206 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 RN7SL720P-201ENST00000488178 304 ntBASIC14.65□□□□□ -0.06
PCDH8O95206 AC006122.1-201ENST00000493323 440 ntBASIC14.65□□□□□ -0.06
PCDH8O95206 NUP210P1-202ENST00000504322 710 ntBASIC14.65□□□□□ -0.06
PCDH8O95206 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH8O95206 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 AC133540.1-201ENST00000620845 1019 ntBASIC14.65□□□□□ -0.06
PCDH8O95206 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH8O95206 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH8O95206 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH8O95206 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
PCDH8O95206 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.07
PCDH8O95206 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH8O95206 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH8O95206 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH8O95206 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 AC078875.1-201ENST00000431907 724 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH8O95206 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 RN7SL769P-201ENST00000469386 295 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 IMP3P2-201ENST00000489760 475 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH8O95206 CHMP4BP1-201ENST00000556017 588 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 AL161670.2-201ENST00000557650 1227 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 FGFR3P5-201ENST00000564496 886 ntBASIC14.64□□□□□ -0.07
PCDH8O95206 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH8O95206 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
PCDH8O95206 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms