Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.43□□□□□ -0.26
KRT33AO76009 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.43□□□□□ -0.26
KRT33AO76009 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 AC018665.1-201ENST00000622927 1362 ntBASIC13.43□□□□□ -0.26
KRT33AO76009 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 MTHFR-210ENST00000641407 2387 ntBASIC13.43□□□□□ -0.26
KRT33AO76009 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.43□□□□□ -0.26
KRT33AO76009 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
KRT33AO76009 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
KRT33AO76009 MBLAC2-202ENST00000514906 1936 ntBASIC13.43□□□□□ -0.26
KRT33AO76009 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRT33AO76009 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 MSTO2P-201ENST00000314835 1709 ntBASIC13.42□□□□□ -0.26
KRT33AO76009 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
KRT33AO76009 TMEM14DP-201ENST00000422205 345 ntBASIC13.42□□□□□ -0.26
KRT33AO76009 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.42□□□□□ -0.26
KRT33AO76009 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.42□□□□□ -0.26
KRT33AO76009 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.42□□□□□ -0.26
KRT33AO76009 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
KRT33AO76009 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 AC145423.3-201ENST00000615987 467 ntBASIC13.42□□□□□ -0.26
KRT33AO76009 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.42□□□□□ -0.26
KRT33AO76009 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KRT33AO76009 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.42□□□□□ -0.26
KRT33AO76009 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.41□□□□□ -0.26
KRT33AO76009 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
KRT33AO76009 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.41□□□□□ -0.26
KRT33AO76009 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.41□□□□□ -0.26
KRT33AO76009 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
KRT33AO76009 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
KRT33AO76009 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 AC097359.2-201ENST00000604992 2389 ntBASIC13.41□□□□□ -0.26
KRT33AO76009 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KRT33AO76009 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
KRT33AO76009 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.41□□□□□ -0.26
KRT33AO76009 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.41□□□□□ -0.26
KRT33AO76009 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms