Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.43■□□□□ 0.06
OPHN1O60890 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
OPHN1O60890 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
OPHN1O60890 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
OPHN1O60890 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
OPHN1O60890 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
OPHN1O60890 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 KLF2P2-201ENST00000416807 1039 ntBASIC15.42■□□□□ 0.06
OPHN1O60890 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.42■□□□□ 0.06
OPHN1O60890 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 IGHJ2P-201ENST00000454480 60 ntBASIC15.42■□□□□ 0.06
OPHN1O60890 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.42■□□□□ 0.06
OPHN1O60890 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.42■□□□□ 0.06
OPHN1O60890 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.42■□□□□ 0.06
OPHN1O60890 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.42■□□□□ 0.06
OPHN1O60890 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.42■□□□□ 0.06
OPHN1O60890 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
OPHN1O60890 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
OPHN1O60890 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
OPHN1O60890 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 Z93015.1-201ENST00000451718 390 ntBASIC15.41■□□□□ 0.06
OPHN1O60890 AC104306.2-201ENST00000451877 341 ntBASIC15.41■□□□□ 0.06
OPHN1O60890 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.41■□□□□ 0.06
OPHN1O60890 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.41■□□□□ 0.06
OPHN1O60890 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 AP005019.2-201ENST00000615104 511 ntBASIC15.41■□□□□ 0.06
OPHN1O60890 AC244452.3-201ENST00000636814 210 ntBASIC15.41■□□□□ 0.06
OPHN1O60890 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
OPHN1O60890 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 BX640514.1-201ENST00000583223 1918 ntBASIC15.41■□□□□ 0.06
OPHN1O60890 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
OPHN1O60890 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
OPHN1O60890 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
OPHN1O60890 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms