Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 OR2I1P-208ENST00000641137 4948 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.41□□□□□ -0.58
PDE6DO43924 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 AC011481.3-201ENST00000623895 5594 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 AL645937.2-201ENST00000396808 931 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 TOMM22P5-201ENST00000416399 439 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.41□□□□□ -0.58
PDE6DO43924 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.41□□□□□ -0.58
PDE6DO43924 AC018845.2-201ENST00000568326 409 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 AL445209.1-201ENST00000607269 3491 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
PDE6DO43924 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
PDE6DO43924 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6DO43924 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 AL136172.1-201ENST00000598590 1394 ntBASIC11.41□□□□□ -0.58
PDE6DO43924 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6DO43924 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 AC073957.3-201ENST00000609998 6758 ntBASIC11.4□□□□□ -0.58
PDE6DO43924 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
PDE6DO43924 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
PDE6DO43924 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.4□□□□□ -0.58
PDE6DO43924 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PDE6DO43924 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PDE6DO43924 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.4□□□□□ -0.58
PDE6DO43924 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 HLA-K-203ENST00000430151 1046 ntBASIC11.4□□□□□ -0.58
PDE6DO43924 SPCS2P4-201ENST00000436160 681 ntBASIC11.4□□□□□ -0.58
PDE6DO43924 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.4□□□□□ -0.58
PDE6DO43924 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.4□□□□□ -0.58
PDE6DO43924 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 RNA5SP415-201ENST00000517246 115 ntBASIC11.4□□□□□ -0.58
PDE6DO43924 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.4□□□□□ -0.58
PDE6DO43924 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.4□□□□□ -0.58
PDE6DO43924 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms