Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLDN5O00501 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLDN5O00501 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLDN5O00501 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 KRT18P36-201ENST00000411618 1276 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN5O00501 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 TPT1P11-201ENST00000458482 498 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 SORD2P-201ENST00000558556 1069 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN5O00501 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 RN7SL774P-201ENST00000577467 290 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
CLDN5O00501 AL805961.1-203ENST00000641078 1258 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLDN5O00501 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
CLDN5O00501 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 AC018629.1-201ENST00000623381 1736 ntBASIC15.42■□□□□ 0.06
CLDN5O00501 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN5O00501 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN5O00501 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN5O00501 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLDN5O00501 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.41■□□□□ 0.06
CLDN5O00501 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 AC011742.3-201ENST00000439053 820 ntBASIC15.41■□□□□ 0.06
CLDN5O00501 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
CLDN5O00501 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN5O00501 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN5O00501 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 AC091544.8-201ENST00000619490 361 ntBASIC15.41■□□□□ 0.06
CLDN5O00501 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN5O00501 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN5O00501 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN5O00501 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN5O00501 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN5O00501 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN5O00501 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN5O00501 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms