Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCRL2O00421 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 KRT18P13-201ENST00000400056 1290 ntBASIC13.29□□□□□ -0.28
CCRL2O00421 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.29□□□□□ -0.28
CCRL2O00421 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.29□□□□□ -0.28
CCRL2O00421 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CCRL2O00421 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.29□□□□□ -0.28
CCRL2O00421 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCRL2O00421 MIR6069-201ENST00000620069 79 ntBASIC13.29□□□□□ -0.28
CCRL2O00421 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCRL2O00421 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCRL2O00421 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCRL2O00421 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.29□□□□□ -0.28
CCRL2O00421 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 MEX3B-202ENST00000558133 4333 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 TOMM22P5-201ENST00000416399 439 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 BX842568.4-201ENST00000421222 227 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 KRT8P48-201ENST00000515599 1220 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
CCRL2O00421 AC005829.1-201ENST00000570002 483 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.28□□□□□ -0.28
CCRL2O00421 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CCRL2O00421 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
CCRL2O00421 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CCRL2O00421 AC055717.3-201ENST00000622967 595 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
CCRL2O00421 AF228730.6-201ENST00000641497 218 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 AC084121.3-201ENST00000641716 218 ntBASIC13.28□□□□□ -0.28
CCRL2O00421 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.28□□□□□ -0.28
CCRL2O00421 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCRL2O00421 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms