Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
O00370 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.66■□□□□ 0.1
O00370 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.66■□□□□ 0.1
O00370 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
O00370 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.66■□□□□ 0.1
O00370 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.66■□□□□ 0.1
O00370 AC079178.1-201ENST00000420915 656 ntBASIC15.66■□□□□ 0.1
O00370 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.66■□□□□ 0.1
O00370 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.66■□□□□ 0.1
O00370 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.66■□□□□ 0.1
O00370 AL583810.1-201ENST00000553344 1045 ntBASIC15.66■□□□□ 0.1
O00370 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.66■□□□□ 0.1
O00370 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.66■□□□□ 0.1
O00370 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.66■□□□□ 0.1
O00370 AC010328.2-201ENST00000597698 1111 ntBASIC15.66■□□□□ 0.1
O00370 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.66■□□□□ 0.1
O00370 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 KHSRPP1-201ENST00000427983 1768 ntBASIC15.66■□□□□ 0.1
O00370 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.66■□□□□ 0.1
O00370 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
O00370 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.65■□□□□ 0.1
O00370 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 MYADML-201ENST00000474610 2147 ntBASIC15.65■□□□□ 0.1
O00370 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 AC152010.1-201ENST00000415779 2006 ntBASIC15.65■□□□□ 0.1
O00370 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
O00370 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
O00370 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
O00370 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.65■□□□□ 0.1
O00370 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 MIR326-201ENST00000362220 95 ntBASIC15.65■□□□□ 0.1
O00370 CICP12-201ENST00000455801 843 ntBASIC15.65■□□□□ 0.1
O00370 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.65■□□□□ 0.1
O00370 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.65■□□□□ 0.1
O00370 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.65■□□□□ 0.1
O00370 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.65■□□□□ 0.1
O00370 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.65■□□□□ 0.1
O00370 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.65■□□□□ 0.1
O00370 MIR4783-201ENST00000580343 82 ntBASIC15.65■□□□□ 0.1
O00370 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.65■□□□□ 0.1
O00370 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.65■□□□□ 0.1
O00370 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.65■□□□□ 0.1
O00370 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
O00370 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.65■□□□□ 0.1
O00370 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
O00370 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
O00370 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
O00370 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
O00370 KRT8P28-201ENST00000433288 1390 ntBASIC15.64■□□□□ 0.09
O00370 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
O00370 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
O00370 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.64■□□□□ 0.09
O00370 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.64■□□□□ 0.09
O00370 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
O00370 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.64■□□□□ 0.09
O00370 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms