Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CARMN-205ENST00000518014 5131 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CROT-203ENST00000419147 2959 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC00982-205ENST00000420957 435 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SAPCD2P4-201ENST00000424595 1171 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CD320-202ENST00000537716 1119 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 NT5C-210ENST00000582160 860 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 LITAF-220ENST00000620789 692 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 AC009078.3-201ENST00000624205 4084 ntBASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 NTM-206ENST00000427481 2583 ntTSL 5 BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CHKB-CPT1BH3BT56 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GBP1P1-201ENST00000394662 1740 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PCDHGB8P-201ENST00000502926 1973 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ITGBL1-205ENST00000545560 4808 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 C22orf46-201ENST00000402966 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GUK1-205ENST00000366722 850 ntTSL 3 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms