Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
COLCA2A8K830 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
COLCA2A8K830 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
COLCA2A8K830 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
COLCA2A8K830 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC11.19□□□□□ -0.62
COLCA2A8K830 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.19□□□□□ -0.62
COLCA2A8K830 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 AC018645.3-201ENST00000628855 2646 ntBASIC11.18□□□□□ -0.62
COLCA2A8K830 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.18□□□□□ -0.62
COLCA2A8K830 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.18□□□□□ -0.62
COLCA2A8K830 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.18□□□□□ -0.62
COLCA2A8K830 AC096582.2-201ENST00000510860 516 ntBASIC11.18□□□□□ -0.62
COLCA2A8K830 DLX3-202ENST00000512495 834 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.18□□□□□ -0.62
COLCA2A8K830 AL109923.1-201ENST00000618799 583 ntBASIC11.18□□□□□ -0.62
COLCA2A8K830 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 LINC02486-201ENST00000604157 3000 ntBASIC11.18□□□□□ -0.62
COLCA2A8K830 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC11.18□□□□□ -0.62
COLCA2A8K830 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC11.18□□□□□ -0.62
COLCA2A8K830 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
COLCA2A8K830 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
COLCA2A8K830 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
COLCA2A8K830 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC11.17□□□□□ -0.62
COLCA2A8K830 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
COLCA2A8K830 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.17□□□□□ -0.62
COLCA2A8K830 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.17□□□□□ -0.62
COLCA2A8K830 AL162430.1-201ENST00000480705 870 ntBASIC11.17□□□□□ -0.62
COLCA2A8K830 PRYP6-201ENST00000514804 343 ntBASIC11.17□□□□□ -0.62
COLCA2A8K830 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.17□□□□□ -0.62
COLCA2A8K830 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 KLF13-207ENST00000560473 489 ntTSL 3 BASIC11.17□□□□□ -0.62
COLCA2A8K830 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.17□□□□□ -0.62
COLCA2A8K830 BNIP3P18-201ENST00000593976 575 ntBASIC11.17□□□□□ -0.62
COLCA2A8K830 AC025181.2-201ENST00000606994 802 ntBASIC11.17□□□□□ -0.62
COLCA2A8K830 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
COLCA2A8K830 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms