Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L3A6NE82 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 MTHFR-210ENST00000641407 2387 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 AP000356.3-201ENST00000382243 753 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 AC078991.1-201ENST00000437297 610 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 TPT1P11-201ENST00000458482 498 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 AC242376.2-201ENST00000619355 883 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NORAD-201ENST00000565493 5339 ntBASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L3A6NE82 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AC023824.1-201ENST00000562945 2975 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L3A6NE82 AL512430.1-201ENST00000392575 860 ntBASIC12.75□□□□□ -0.37
MBD3L3A6NE82 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms