Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.16□□□□□ -0.46
A0A1W2PRF3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 AC015818.8-201ENST00000587907 1519 ntBASIC12.16□□□□□ -0.46
A0A1W2PRF3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.16□□□□□ -0.46
A0A1W2PRF3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
A0A1W2PRF3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC099548.2-209ENST00000480264 625 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 RPSAP36-202ENST00000494591 1261 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC100850.1-201ENST00000506768 649 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 MIR4525-201ENST00000580000 75 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ZACNP1-201ENST00000612259 710 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 AL096828.3-201ENST00000615354 462 ntBASIC12.15□□□□□ -0.46
A0A1W2PRF3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.15□□□□□ -0.46
A0A1W2PRF3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
A0A1W2PRF3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
A0A1W2PRF3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
A0A1W2PRF3 AC139749.1-202ENST00000617529 3139 ntBASIC12.15□□□□□ -0.47
A0A1W2PRF3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
A0A1W2PRF3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
A0A1W2PRF3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
A0A1W2PRF3 AC003102.2-201ENST00000589195 1469 ntBASIC12.14□□□□□ -0.47
A0A1W2PRF3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
A0A1W2PRF3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
A0A1W2PRF3 AC013726.1-201ENST00000563747 2285 ntBASIC12.14□□□□□ -0.47
A0A1W2PRF3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
A0A1W2PRF3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.14□□□□□ -0.47
A0A1W2PRF3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
A0A1W2PRF3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
A0A1W2PRF3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.14□□□□□ -0.47
A0A1W2PRF3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
A0A1W2PRF3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms