Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.6□□□□□ -0.55
TSSC4Q9Y5U2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TSSC4Q9Y5U2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LILRP1-201ENST00000444199 1370 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 WASH3P-207ENST00000560956 1394 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AL662890.1-201ENST00000396818 632 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 TLE1P1-201ENST00000422965 589 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ACTG1P17-201ENST00000558391 1119 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AC005730.2-201ENST00000564549 1184 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MIR4683-201ENST00000579659 81 ntBASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.59□□□□□ -0.55
TSSC4Q9Y5U2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
TSSC4Q9Y5U2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
TSSC4Q9Y5U2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
TSSC4Q9Y5U2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC11.58□□□□□ -0.56
TSSC4Q9Y5U2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms