Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 CNN2P10-201ENST00000443067 918 ntBASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AC105129.2-201ENST00000559536 390 ntBASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 AC023090.2-201ENST00000625182 2110 ntBASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 MTHFR-210ENST00000641407 2387 ntBASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FNDC3AQ9Y2H6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC117489.1-201ENST00000625169 3217 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AL662890.1-201ENST00000396818 632 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 MIR663B-201ENST00000408361 115 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 RN7SL48P-201ENST00000579283 293 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AC016629.1-201ENST00000596579 586 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 AL451050.2-201ENST00000606967 682 ntBASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.1■□□□□ 0.01
FNDC3AQ9Y2H6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms