Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 MAPK10-350ENST00000641777 965 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CICP4-201ENST00000447359 2812 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 MIR600HG-201ENST00000449175 5984 ntBASIC14.17□□□□□ -0.14
LHX6Q9UPM6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LHX6Q9UPM6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 CDY3P-201ENST00000454543 1618 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AL592076.1-201ENST00000424448 303 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 LINC00879-205ENST00000470465 757 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AP002981.1-201ENST00000517692 975 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 IGHEP1-201ENST00000521393 651 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AP003171.2-201ENST00000528208 925 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC087888.1-201ENST00000550884 1254 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC104640.1-201ENST00000562617 2109 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC027139.1-201ENST00000565286 951 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 PTPN20CP-201ENST00000614090 920 ntBASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.16□□□□□ -0.14
LHX6Q9UPM6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 LRRC59-203ENST00000576448 1531 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SNX18-202ENST00000343017 3140 ntBASIC14.15□□□□□ -0.14
LHX6Q9UPM6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LHX6Q9UPM6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms