Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 RPSAP43-201ENST00000402237 625 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CEND1P1-201ENST00000451006 455 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC005829.1-201ENST00000570002 483 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AL031055.1-201ENST00000606362 631 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC012531.1-201ENST00000562848 2680 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC072061.1-201ENST00000569710 2234 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 AC110048.1-201ENST00000604293 2157 ntBASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBQLN2Q9UHD9 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 HTR5BP-201ENST00000430851 1154 ntBASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 AC112191.1-201ENST00000523689 701 ntBASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 C20orf181-201ENST00000623918 480 ntBASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBQLN2Q9UHD9 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 AGGF1P1-201ENST00000509500 2073 ntBASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UBQLN2Q9UHD9 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms