Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 BX679664.3-201ENST00000414070 555 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 PGAM1P11-201ENST00000416729 680 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 FAM197Y6-201ENST00000420524 766 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AL137244.1-201ENST00000422931 865 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC104961.1-201ENST00000427605 771 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC113935.1-201ENST00000471722 555 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 MIR2278-201ENST00000516344 96 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AC090510.3-201ENST00000615831 821 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DKK4Q9UBT3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC008536.3-201ENST00000623282 1599 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 FAM21EP-201ENST00000417804 985 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 PRSS3P1-201ENST00000503996 742 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 NEK4P3-201ENST00000604859 544 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC091769.1-201ENST00000619576 568 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC005274.1-201ENST00000623460 802 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 C18orf15-201ENST00000623680 2534 ntBASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.38□□□□□ -0.27
DKK4Q9UBT3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DKK4Q9UBT3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
DKK4Q9UBT3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DKK4Q9UBT3 AP000845.1-201ENST00000581677 2131 ntBASIC13.37□□□□□ -0.27
DKK4Q9UBT3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DKK4Q9UBT3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms