Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC090505.1-201ENST00000430515 1834 ntBASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ENPP7P5-201ENST00000541031 1031 ntBASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC124283.3-201ENST00000570869 594 ntBASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 CTBP2P3-201ENST00000585629 1255 ntBASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 LINC02084-201ENST00000606069 1096 ntBASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIN7CQ9NUP9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LIN7CQ9NUP9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms