Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC012441.2-201ENST00000444843 739 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AL591846.1-201ENST00000451736 433 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC006122.1-201ENST00000493323 440 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC005695.3-201ENST00000614522 232 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC022748.3-201ENST00000621828 275 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 AC018735.1-201ENST00000437208 1502 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 TUBB1P2-201ENST00000422712 1306 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 TUBB1P1-201ENST00000503144 1300 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 BTBD6P1-201ENST00000412176 1267 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 FAM58BP-201ENST00000439056 645 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 VDAC1P1-201ENST00000439229 848 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 AC011474.4-201ENST00000623523 2076 ntBASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.22■□□□□ 0.19
BLOC1S4Q9NUP1 TUBB8P4-201ENST00000511806 1324 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC090643.2-201ENST00000623442 2029 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 KRT18P36-201ENST00000411618 1276 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.21■□□□□ 0.19
BLOC1S4Q9NUP1 RPS2P32-201ENST00000439199 892 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms