Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC003102.2-201ENST00000589195 1469 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC241585.1-201ENST00000433527 519 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 GIMAP3P-201ENST00000495150 836 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AL662799.1-202ENST00000614205 422 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC107918.4-201ENST00000641966 3141 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC105206.1-202ENST00000314927 2368 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AC090643.2-201ENST00000623442 2029 ntBASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CTNNBIP1Q9NSA3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC023794.5-201ENST00000564380 2157 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC009477.1-201ENST00000452936 217 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC135586.1-201ENST00000539323 574 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC007431.3-201ENST00000623221 587 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AL359183.1-201ENST00000623796 2132 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 HSPA8P5-201ENST00000456928 2069 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 AC073548.1-201ENST00000624088 1882 ntBASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CTNNBIP1Q9NSA3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms