Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC090857.1-201ENST00000527400 390 ntBASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 AC005089.1-201ENST00000619486 2241 ntBASIC12.93□□□□□ -0.34
KIAA1549Q9HCM3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 MIR3188-201ENST00000583494 85 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AC128714.1-201ENST00000637035 887 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 RPS9P1-201ENST00000419943 583 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 FGFR3P1-201ENST00000449999 601 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 RPL17P45-201ENST00000586289 509 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 AC018635.2-201ENST00000608625 364 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms