Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP3Q9BWW4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC010141.1-201ENST00000411585 623 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC022494.1-201ENST00000466044 728 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC126915.1-201ENST00000522847 1038 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC079416.2-201ENST00000625035 1193 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 AC244452.3-201ENST00000636814 210 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 LINC00552-201ENST00000625151 2579 ntBASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP3Q9BWW4 KRT8P29-201ENST00000420409 1371 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 FAM58BP-201ENST00000439056 645 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 TUBB8P8-201ENST00000458717 1058 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AC091804.1-201ENST00000486888 567 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 GCOM2-201ENST00000509133 1104 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 AC131206.1-201ENST00000538078 1211 ntBASIC12.3□□□□□ -0.44
SSBP3Q9BWW4 DUX4L46-201ENST00000566845 751 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms