Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC093813.1-201ENST00000605066 256 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 AC100757.3-201ENST00000622361 1406 ntBASIC14.33□□□□□ -0.11
EBF4Q9BQW3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.33□□□□□ -0.11
EBF4Q9BQW3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 KHSRPP1-201ENST00000427983 1768 ntBASIC14.33□□□□□ -0.12
EBF4Q9BQW3 CNN2P11-201ENST00000429351 262 ntBASIC14.33□□□□□ -0.12
EBF4Q9BQW3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 AL590560.3-201ENST00000623350 461 ntBASIC14.33□□□□□ -0.12
EBF4Q9BQW3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 AC139712.1-201ENST00000378256 1875 ntBASIC14.33□□□□□ -0.12
EBF4Q9BQW3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EBF4Q9BQW3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC135782.3-201ENST00000562782 2105 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AL118506.1-201ENST00000601296 3082 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC254562.1-201ENST00000417586 456 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 KLF2P3-201ENST00000451977 1087 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC009477.1-201ENST00000452936 217 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 SORD2P-201ENST00000558556 1069 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC009407.1-201ENST00000568958 598 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 MIR3687-2-201ENST00000577708 61 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 AC004790.1-201ENST00000612686 536 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 MIR3687-1-201ENST00000614492 61 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms