Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 MIR6752-201ENST00000618442 71 ntBASIC12.33□□□□□ -0.44
CCL13Q99616 AC027601.3-201ENST00000622907 509 ntBASIC12.33□□□□□ -0.44
CCL13Q99616 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 AC099063.4-201ENST00000641099 1602 ntBASIC12.33□□□□□ -0.44
CCL13Q99616 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL13Q99616 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL13Q99616 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC015818.8-201ENST00000587907 1519 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 E2F3P2-201ENST00000447755 1422 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 MIR326-201ENST00000362220 95 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 MTX1P1-201ENST00000440904 838 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 CICP12-201ENST00000455801 843 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC008825.2-201ENST00000603374 718 ntBASIC12.32□□□□□ -0.44
CCL13Q99616 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL13Q99616 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL13Q99616 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL13Q99616 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 AC139712.1-201ENST00000378256 1875 ntBASIC12.31□□□□□ -0.44
CCL13Q99616 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL13Q99616 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL13Q99616 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL13Q99616 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms