Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 AL451000.1-201ENST00000451300 1186 ntBASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 AC006529.1-201ENST00000459978 637 ntBASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 GOLGA2P7-209ENST00000560408 745 ntBASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBGCP6Q96RT7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AF274858.1-201ENST00000406288 372 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AC018638.5-201ENST00000450885 754 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AC067931.2-201ENST00000623655 2003 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 LINC02228-204ENST00000642115 2962 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AC009093.10-201ENST00000641956 1442 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 RPS18P9-201ENST00000482817 460 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AL590235.1-201ENST00000564650 861 ntBASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBGCP6Q96RT7 AC019109.1-201ENST00000401725 1874 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 HSPA7-201ENST00000445535 1927 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 RNVU1-8-201ENST00000364272 125 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AC023141.7-201ENST00000430646 407 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 NAV1-210ENST00000593583 726 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 AL160191.2-201ENST00000603975 601 ntBASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBGCP6Q96RT7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms