Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 IGLL3P-201ENST00000412472 434 ntBASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 RHOQP3-201ENST00000437982 621 ntBASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 HNRNPDP1-201ENST00000439535 754 ntBASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 VN2R19P-201ENST00000442399 1052 ntBASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB3IPQ96QF0 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC142381.1-201ENST00000426099 345 ntBASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AL773604.1-201ENST00000617417 272 ntBASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC148477.8-201ENST00000624298 468 ntBASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AC010507.1-201ENST00000633895 436 ntBASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3IPQ96QF0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms