Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC85AQ96PX6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CCDC85AQ96PX6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.14■□□□□ 0.5
CCDC85AQ96PX6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC85AQ96PX6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AC019193.1-201ENST00000506678 823 ntBASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AC008723.1-201ENST00000506922 207 ntBASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AC003686.1-201ENST00000550956 1034 ntBASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 AC063926.3-201ENST00000624734 5658 ntBASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC85AQ96PX6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 INTS4P1-203ENST00000641008 3683 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 KHSRPP1-201ENST00000427983 1768 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 TSPY25P-201ENST00000429463 745 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 PGAM1P5-201ENST00000548011 764 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 MIR3677-201ENST00000578964 60 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 AC018635.2-201ENST00000608625 364 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 AC073352.2-201ENST00000609385 439 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 AC009093.10-201ENST00000641956 1442 ntBASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC85AQ96PX6 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms