Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.01□□□□□ -0.65
RNF183Q96D59 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.01□□□□□ -0.65
RNF183Q96D59 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RNF183Q96D59 CICP11-201ENST00000434745 2827 ntBASIC11.01□□□□□ -0.65
RNF183Q96D59 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RNF183Q96D59 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RNF183Q96D59 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.01□□□□□ -0.65
RNF183Q96D59 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RNF183Q96D59 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11□□□□□ -0.65
RNF183Q96D59 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 BTBD6P1-201ENST00000412176 1267 ntBASIC11□□□□□ -0.65
RNF183Q96D59 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 POM121L8P-201ENST00000417732 1281 ntBASIC11□□□□□ -0.65
RNF183Q96D59 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 POM121L9P-203ENST00000441984 1285 ntBASIC11□□□□□ -0.65
RNF183Q96D59 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11□□□□□ -0.65
RNF183Q96D59 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11□□□□□ -0.65
RNF183Q96D59 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RNF183Q96D59 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 AC131902.2-201ENST00000566892 2172 ntBASIC11□□□□□ -0.65
RNF183Q96D59 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11□□□□□ -0.65
RNF183Q96D59 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11□□□□□ -0.65
RNF183Q96D59 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RNF183Q96D59 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RNF183Q96D59 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RNF183Q96D59 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RNF183Q96D59 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RNF183Q96D59 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms