Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 HIST2H2BB-201ENST00000449108 381 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 Z93015.1-201ENST00000451718 390 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 AC104306.2-201ENST00000451877 341 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 TMEM198B-204ENST00000484016 896 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 AC091804.1-201ENST00000486888 567 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 FAM86HP-204ENST00000513466 959 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 AC027237.1-201ENST00000560942 655 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.6■□□□□ 0.09
DDX1Q92499 MIR4783-201ENST00000580343 82 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.6■□□□□ 0.09
DDX1Q92499 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
DDX1Q92499 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DDX1Q92499 SHC1P1-201ENST00000425230 1745 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 PKD1P5-201ENST00000532415 10291 ntBASIC15.6■□□□□ 0.09
DDX1Q92499 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
DDX1Q92499 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.59■□□□□ 0.09
DDX1Q92499 TCAM1P-207ENST00000485295 1537 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.59■□□□□ 0.09
DDX1Q92499 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.59■□□□□ 0.09
DDX1Q92499 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 MST1P2-201ENST00000457982 2291 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
DDX1Q92499 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.59■□□□□ 0.09
DDX1Q92499 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 MAGEA5-201ENST00000446757 942 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 AC004898.1-201ENST00000451057 766 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.59■□□□□ 0.09
DDX1Q92499 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 AC020914.3-201ENST00000594712 304 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 NFIC-211ENST00000641145 8399 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 AC064801.2-201ENST00000625052 1303 ntBASIC15.59■□□□□ 0.09
DDX1Q92499 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.59■□□□□ 0.09
DDX1Q92499 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
DDX1Q92499 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DDX1Q92499 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
DDX1Q92499 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.58■□□□□ 0.09
DDX1Q92499 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
DDX1Q92499 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DDX1Q92499 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
DDX1Q92499 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
DDX1Q92499 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.58■□□□□ 0.09
DDX1Q92499 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
DDX1Q92499 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
DDX1Q92499 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DDX1Q92499 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
DDX1Q92499 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms