Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ODCP-201ENST00000459650 1639 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 KRT8P18-201ENST00000413425 1445 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 BX679664.3-201ENST00000414070 555 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 AC113935.1-201ENST00000471722 555 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.45■□□□□ 0.38
SNED1Q8TER0 AC104506.1-201ENST00000609247 429 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 CASP16P-204ENST00000635032 809 ntBASIC17.45■□□□□ 0.38
SNED1Q8TER0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNED1Q8TER0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 OR52M2P-201ENST00000414298 959 ntBASIC17.44■□□□□ 0.38
SNED1Q8TER0 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 AC083801.1-201ENST00000491689 358 ntBASIC17.44■□□□□ 0.38
SNED1Q8TER0 CHCHD2P2-201ENST00000503744 321 ntBASIC17.44■□□□□ 0.38
SNED1Q8TER0 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNED1Q8TER0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.44■□□□□ 0.38
SNED1Q8TER0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms