Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 ACTBP14-201ENST00000411655 1089 ntBASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 ISL1-203ENST00000511384 981 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 MIR181D-201ENST00000384853 137 ntBASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 ABCD1P4-201ENST00000399687 604 ntBASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 CCND3P2-201ENST00000579393 537 ntBASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 NAT9-219ENST00000582524 573 ntTSL 4 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
ALMS1Q8TCU4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AL137244.1-201ENST00000422931 865 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC022447.5-201ENST00000504817 392 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 Z82244.2-201ENST00000632196 448 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 RN7SL351P-201ENST00000469306 248 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SRPK2P-201ENST00000523408 1100 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 GH1-203ENST00000351388 685 ntTSL 2 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 KRT18P33-201ENST00000398525 1043 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 YY1P2-201ENST00000438766 948 ntBASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC9.5□□□□□ -0.89
ALMS1Q8TCU4 PRDX3P2-201ENST00000447051 611 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms