Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC015909.3-201ENST00000572855 1794 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC007881.3-201ENST00000608897 607 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC009560.1-201ENST00000620208 434 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC023090.2-201ENST00000625182 2110 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 KRT8P31-201ENST00000504812 1408 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AC025271.4-201ENST00000621477 1726 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 LINC01101-201ENST00000622953 1884 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AGAP7P-201ENST00000582299 2062 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 AGAP14-201ENST00000624701 2060 ntBASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNPOQ8N3V7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RN7SL81P-201ENST00000493781 261 ntBASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 IGHV3-37-201ENST00000518544 340 ntBASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AC009084.3-201ENST00000623356 437 ntBASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNPOQ8N3V7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms