Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 DKKL1P1-201ENST00000400550 698 ntBASIC20.05■□□□□ 0.8
UBR1Q8IWV7 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 PSME2P2-201ENST00000453033 700 ntBASIC20.05■□□□□ 0.8
UBR1Q8IWV7 SNRPD2P2-201ENST00000473818 333 ntBASIC20.05■□□□□ 0.8
UBR1Q8IWV7 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 URB1-AS1-201ENST00000534991 831 ntBASIC20.05■□□□□ 0.8
UBR1Q8IWV7 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.05■□□□□ 0.8
UBR1Q8IWV7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 LILRP2-202ENST00000413572 1383 ntBASIC20.04■□□□□ 0.8
UBR1Q8IWV7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 AGAP7P-201ENST00000582299 2062 ntBASIC20.04■□□□□ 0.8
UBR1Q8IWV7 AGAP14-201ENST00000624701 2060 ntBASIC20.04■□□□□ 0.8
UBR1Q8IWV7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBR1Q8IWV7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.03■□□□□ 0.8
UBR1Q8IWV7 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC20.03■□□□□ 0.8
UBR1Q8IWV7 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 AC084018.2-201ENST00000613093 2607 ntBASIC20.03■□□□□ 0.8
UBR1Q8IWV7 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBR1Q8IWV7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AL773545.2-201ENST00000442149 472 ntBASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AC099328.1-201ENST00000498809 1030 ntBASIC20.02■□□□□ 0.8
UBR1Q8IWV7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AC123912.6-201ENST00000612657 315 ntBASIC20.02■□□□□ 0.8
UBR1Q8IWV7 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBR1Q8IWV7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 AHCYP3-201ENST00000420053 1279 ntBASIC20.02■□□□□ 0.79
UBR1Q8IWV7 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC20.02■□□□□ 0.79
UBR1Q8IWV7 AC079250.1-201ENST00000456046 531 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms