Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 RN7SL837P-201ENST00000463010 287 ntBASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 AP000593.2-201ENST00000542775 1433 ntBASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC83Q8IWF9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 TCAM1P-207ENST00000485295 1537 ntBASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 TPM3P8-201ENST00000330554 643 ntBASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 SORD2P-201ENST00000558556 1069 ntBASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 AC025279.2-201ENST00000569730 653 ntBASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC83Q8IWF9 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC83Q8IWF9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 PUDPP3-201ENST00000445368 636 ntBASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC83Q8IWF9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms