Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AC020658.7-201ENST00000624274 2442 ntBASIC13.15□□□□□ -0.3
LRRC28Q86X40 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AL133267.1-201ENST00000398220 340 ntBASIC13.15□□□□□ -0.3
LRRC28Q86X40 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.15□□□□□ -0.3
LRRC28Q86X40 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 AC020910.6-201ENST00000623084 1459 ntBASIC13.15□□□□□ -0.3
LRRC28Q86X40 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRC28Q86X40 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC28Q86X40 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LRRC28Q86X40 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
LRRC28Q86X40 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
LRRC28Q86X40 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
LRRC28Q86X40 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 CU639417.3-201ENST00000624240 1404 ntBASIC13.14□□□□□ -0.31
LRRC28Q86X40 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 AP006294.1-201ENST00000415407 339 ntBASIC13.14□□□□□ -0.31
LRRC28Q86X40 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 GAPDHP21-201ENST00000450301 1010 ntBASIC13.14□□□□□ -0.31
LRRC28Q86X40 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRC28Q86X40 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC28Q86X40 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms