Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.32□□□□□ -0.28
ATG4DQ86TL0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MIR1908-201ENST00000410394 80 ntBASIC13.31□□□□□ -0.28
ATG4DQ86TL0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 HSPA8P5-201ENST00000456928 2069 ntBASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 C8orf49-201ENST00000525043 1968 ntBASIC13.31□□□□□ -0.28
ATG4DQ86TL0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ATG4DQ86TL0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 AC041040.2-201ENST00000622926 2899 ntBASIC13.3□□□□□ -0.28
ATG4DQ86TL0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ATG4DQ86TL0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms