Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AC016397.2-201ENST00000624848 1985 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 RNU1-114P-201ENST00000365297 166 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AC106028.4-201ENST00000614509 607 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 CICP20-201ENST00000443330 2801 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 SALL4P5-201ENST00000419001 1760 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MIR497HG-202ENST00000572453 3838 ntBASIC13.09□□□□□ -0.31
ODF4Q2M2E3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF4Q2M2E3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ODF4Q2M2E3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 AL359881.3-201ENST00000602640 1721 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 MBLAC2-202ENST00000514906 1936 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 RPL13AP25-201ENST00000484130 612 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 AC026434.2-201ENST00000506094 1078 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 AC093813.1-201ENST00000605066 256 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 INTS4P2-202ENST00000614726 2019 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 FP325330.2-201ENST00000624219 5630 ntBASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.08□□□□□ -0.32
ODF4Q2M2E3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms