Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.92□□□□□ -0.5
CX3CL1P78423 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CX3CL1P78423 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CICP8-201ENST00000455800 2813 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 TPM3P8-201ENST00000330554 643 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 AC007969.1-201ENST00000433675 447 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.91□□□□□ -0.5
CX3CL1P78423 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.91□□□□□ -0.5
CX3CL1P78423 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.91□□□□□ -0.5
CX3CL1P78423 AC025279.2-201ENST00000569730 653 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CX3CL1P78423 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 ENPP7P14-201ENST00000621765 1040 ntBASIC11.91□□□□□ -0.5
CX3CL1P78423 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CX3CL1P78423 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.91□□□□□ -0.5
CX3CL1P78423 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.91□□□□□ -0.5
CX3CL1P78423 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CX3CL1P78423 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CX3CL1P78423 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 SALL4P5-201ENST00000419001 1760 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CX3CL1P78423 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
CX3CL1P78423 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
CX3CL1P78423 TLE1P1-201ENST00000422965 589 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.9□□□□□ -0.5
CX3CL1P78423 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.9□□□□□ -0.5
CX3CL1P78423 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.9□□□□□ -0.5
CX3CL1P78423 KRT43P-201ENST00000434019 910 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 AC016694.1-201ENST00000434179 700 ntBASIC11.9□□□□□ -0.5
CX3CL1P78423 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CX3CL1P78423 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms